Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylglucosaminyl deacetylase, lmbe family | SAMN04244553_5760 | Not Available | Positive | 6175608 - 6176315 | 25276.6 |
| udp:flavonoid glycosyltransferase yjic, ydhe family | SAMN04244553_5761 | Not Available | Positive | 6176621 - 6177784 | 40134.4 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04244553_5762 | Not Available | Negative | 6177819 - 6178709 | 32325.3 |
| transcriptional regulator, tetr family | SAMN04244553_5763 | Not Available | Negative | 6178706 - 6179413 | 25149.9 |
| protein of unknown function | SAMN04244553_5764 | Not Available | Positive | 6179523 - 6179753 | 8245.84 |
| kanamycin kinase | SAMN04244553_5765 | Not Available | Positive | 6179750 - 6180988 | 45344.4 |
| conserved protein containing a zn-ribbon-like motif, possibly rna-binding | SAMN04244553_5766 | Not Available | Negative | 6180992 - 6181507 | 18987.6 |
| glyoxalase-like domain-containing protein | SAMN04244553_5767 | Not Available | Positive | 6181665 - 6182126 | 16362.1 |
| hypothetical protein | SAMN04244553_5768 | Not Available | Positive | 6182142 - 6183026 | 31669.8 |
| hypothetical protein | SAMN04244553_5769 | Not Available | Positive | 6183046 - 6183498 | 17627.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

