Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase components of abc transporters with duplicated atpase domains | SAMN04244553_5740 | Not Available | Positive | 6159786 - 6161381 | 57334.1 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04244553_5741 | Not Available | Negative | 6161457 - 6162500 | 37596.1 |
| regulatory protein, luxr family | SAMN04244553_5742 | Not Available | Negative | 6162649 - 6165363 | 95498.6 |
| yd repeat-containing protein | SAMN04244553_5743 | Not Available | Positive | 6165485 - 6165913 | 15371.4 |
| hypothetical protein | SAMN04244553_5744 | Not Available | Positive | 6166216 - 6166788 | 19423.7 |
| hypothetical protein | SAMN04244553_5745 | Not Available | Negative | 6166905 - 6167309 | 13501.2 |
| Trna-gln | Not Available | Not Available | Positive | 6167475 - 6167548 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 6167550 - 6167626 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 6167650 - 6167726 | Not Available |
| Trna-trp | Not Available | Not Available | Positive | 6167798 - 6167873 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

