Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna segregation atpase ftsk/spoiiie, s-dna-t family | SAMN04244553_5730 | Not Available | Positive | 6149485 - 6151875 | 85098.8 |
| sap, sulfolipid-1-addressing protein | SAMN04244553_5731 | Not Available | Negative | 6152098 - 6152793 | 24757.3 |
| methyltransferase domain-containing protein | SAMN04244553_5732 | Not Available | Negative | 6152869 - 6153693 | 30612.2 |
| hypothetical protein | SAMN04244553_5733 | Not Available | Positive | 6153791 - 6154216 | 15696.4 |
| hypothetical protein | SAMN04244553_5734 | Not Available | Negative | 6154184 - 6154402 | 7896.47 |
| hypothetical protein | SAMN04244553_5735 | Not Available | Negative | 6154399 - 6154923 | 18931.5 |
| transcriptional regulator, contains xre-family hth domain | SAMN04244553_5736 | Not Available | Negative | 6155071 - 6156300 | 44635.2 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04244553_5737 | Not Available | Positive | 6156642 - 6157481 | 28735.8 |
| catechol 2,3-dioxygenase | SAMN04244553_5738 | Not Available | Positive | 6157516 - 6157959 | 15821.6 |
| dihydrolipoamide dehydrogenase | SAMN04244553_5739 | Not Available | Positive | 6157983 - 6159455 | 52539.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

