Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_5720 | Not Available | Positive | 6139169 - 6140188 | 35602.4 |
| rna polymerase sigma factor, sigma-70 family | SAMN04244553_5721 | Not Available | Negative | 6140195 - 6141091 | 32755.3 |
| haloalkane dehalogenase | SAMN04244553_5722 | Not Available | Negative | 6141274 - 6142146 | 32052.1 |
| hypothetical protein | SAMN04244553_5723 | Not Available | Positive | 6142359 - 6143549 | 44637.4 |
| hicb family protein | SAMN04244553_5724 | Not Available | Negative | 6143721 - 6144164 | 15539.3 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN04244553_5725 | Not Available | Positive | 6144313 - 6145221 | 31422.6 |
| ribonuclease j | SAMN04244553_5726 | Not Available | Positive | 6145265 - 6147352 | 74511.1 |
| hypothetical protein | SAMN04244553_5727 | Not Available | Negative | 6147421 - 6147972 | 19556.8 |
| protein of unknown function | SAMN04244553_5728 | Not Available | Negative | 6148033 - 6148401 | 12469.4 |
| tigr03085 family protein | SAMN04244553_5729 | Not Available | Positive | 6148574 - 6149191 | 22568.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

