Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catechol 2,3-dioxygenase | SAMN04244553_5710 | Not Available | Negative | 6130894 - 6131289 | 14812.3 |
| alcohol dehydrogenase | SAMN04244553_5711 | Not Available | Positive | 6131443 - 6132591 | 38908.0 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN04244553_5712 | Not Available | Positive | 6132747 - 6133631 | 30068.0 |
| dna-binding transcriptional regulator, marr family | SAMN04244553_5713 | Not Available | Negative | 6133612 - 6134064 | 16234.3 |
| hypothetical protein | SAMN04244553_5714 | Not Available | Positive | 6134125 - 6134529 | 15105.0 |
| dihydrodipicolinate reductase | SAMN04244553_5715 | Not Available | Positive | 6135307 - 6136053 | 26297.3 |
| hypothetical protein | SAMN04244553_5716 | Not Available | Positive | 6136100 - 6136627 | 19456.4 |
| multimeric flavodoxin wrba | SAMN04244553_5717 | Not Available | Positive | 6136634 - 6137086 | 15968.1 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN04244553_5718 | Not Available | Positive | 6137174 - 6137893 | 25338.2 |
| signal transduction histidine kinase | SAMN04244553_5719 | Not Available | Positive | 6137857 - 6139176 | 45549.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

