Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_5699 | Not Available | Negative | 6119839 - 6120117 | 10245.8 |
| ssu ribosomal protein s15p | SAMN04244553_5700 | Not Available | Positive | 6120280 - 6120549 | 10379.6 |
| polyribonucleotide nucleotidyltransferase | SAMN04244553_5702 | Not Available | Positive | 6121049 - 6123319 | 80402.7 |
| predicted zn-dependent peptidase | SAMN04244553_5703 | Not Available | Positive | 6123415 - 6124710 | 46874.5 |
| hypothetical protein | SAMN04244553_5704 | Not Available | Positive | 6124755 - 6125138 | 13623.1 |
| hypothetical protein | SAMN04244553_5705 | Not Available | Positive | 6125905 - 6126786 | 32506.9 |
| dna-binding transcriptional regulator, arsr family | SAMN04244553_5706 | Not Available | Negative | 6126805 - 6127146 | 12170.6 |
| predicted arabinose efflux permease, mfs family | SAMN04244553_5707 | Not Available | Positive | 6127170 - 6128468 | 44592.2 |
| hypothetical protein | SAMN04244553_5708 | Not Available | Negative | 6128663 - 6129052 | 14349.0 |
| hypothetical protein | SAMN04244553_5709 | Not Available | Positive | 6129175 - 6130554 | 50645.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

