Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_5689 | Not Available | Positive | 6106858 - 6109623 | 96769.3 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN04244553_5690 | Not Available | Positive | 6110043 - 6110999 | 36116.2 |
| 4'-phosphopantetheinyl transferase entd (siderophore biosynthesis) | SAMN04244553_5691 | Not Available | Positive | 6111032 - 6111700 | 24325.1 |
| trna pseudouridine55 synthase | SAMN04244553_5692 | Not Available | Positive | 6111700 - 6112623 | 32839.4 |
| calmodulin | SAMN04244553_5693 | Not Available | Positive | 6112836 - 6113258 | 14980.2 |
| uncharacterized nad(p)/fad-binding protein ydhs | SAMN04244553_5694 | Not Available | Negative | 6113275 - 6114828 | 54417.1 |
| dna-binding transcriptional regulator, csgd family | SAMN04244553_5695 | Not Available | Positive | 6114995 - 6116110 | 39774.1 |
| hypothetical protein | SAMN04244553_5696 | Not Available | Positive | 6116392 - 6117195 | 27711.7 |
| iron (metal) dependent repressor, dtxr family | SAMN04244553_5697 | Not Available | Negative | 6117233 - 6118003 | 27845.8 |
| fmn adenylyltransferase /riboflavin kinase | SAMN04244553_5698 | Not Available | Positive | 6118460 - 6119452 | 35599.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

