Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_5668 | Not Available | Negative | 6084208 - 6085371 | 42754.1 |
| predicted metal-dependent phosphohydrolase, hd superfamily | SAMN04244553_5670 | Not Available | Positive | 6086441 - 6087094 | 24245.4 |
| hypothetical protein | SAMN04244553_5671 | Not Available | Negative | 6087406 - 6088143 | 25650.0 |
| hypothetical protein | SAMN04244553_5672 | Not Available | Negative | 6088035 - 6088856 | 29828.2 |
| prolyl-trna synthetase | SAMN04244553_5673 | Not Available | Positive | 6088880 - 6090688 | 65879.3 |
| acyl-coa dehydrogenase | SAMN04244553_5674 | Not Available | Positive | 6090991 - 6092742 | 65440.9 |
| protein of unknown function | SAMN04244553_5675 | Not Available | Negative | 6092995 - 6093429 | 15157.9 |
| hypothetical protein | SAMN04244553_5676 | Not Available | Negative | 6093426 - 6094121 | 23376.7 |
| ribosome maturation factor rimp | SAMN04244553_5677 | Not Available | Positive | 6094234 - 6094902 | 23292.2 |
| nusa antitermination factor | SAMN04244553_5678 | Not Available | Positive | 6094899 - 6095927 | 36615.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

