Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalt-precorrin 5a hydrolase | SAMN04244553_5647 | Not Available | Positive | 6062731 - 6063138 | 13230.1 |
| hypothetical protein | SAMN04244553_5648 | Not Available | Positive | 6063318 - 6063449 | 4469.47 |
| helix-turn-helix domain-containing protein | SAMN04244553_5649 | Not Available | Positive | 6063773 - 6064996 | 44023.9 |
| hypothetical protein | SAMN04244553_5650 | Not Available | Negative | 6065100 - 6066203 | 40604.6 |
| predicted kinase, aminoglycoside phosphotransferase (apt) family | SAMN04244553_5651 | Not Available | Negative | 6066212 - 6067342 | 42430.0 |
| hypothetical protein | SAMN04244553_5652 | Not Available | Positive | 6067833 - 6069188 | 50210.1 |
| mfs transporter, dha2 family, lincomycin resistance protein | SAMN04244553_5653 | Not Available | Negative | 6069295 - 6070788 | 52193.6 |
| uroporphyrin-iii c-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase | SAMN04244553_5654 | Not Available | Positive | 6071310 - 6072575 | 43695.4 |
| drug resistance transporter, emrb/qaca subfamily | SAMN04244553_5655 | Not Available | Positive | 6072649 - 6074133 | 50449.4 |
| ppox class probable f420-dependent enzyme | SAMN04244553_5656 | Not Available | Negative | 6074190 - 6074636 | 16480.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

