Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN04244553_0661 | Not Available | Positive | 482857 - 483501 | 23438.8 |
| hypothetical protein | SAMN04244553_0662 | Not Available | Negative | 483546 - 483782 | 8530.03 |
| s-adenosyl methyltransferase | SAMN04244553_0663 | Not Available | Negative | 484122 - 484919 | 29348.8 |
| protein of unknown function | SAMN04244553_0664 | Not Available | Positive | 485283 - 485507 | 7851.09 |
| helix-turn-helix domain-containing protein | SAMN04244553_0665 | Not Available | Positive | 485597 - 486484 | 33029.6 |
| hypothetical protein | SAMN04244553_0666 | Not Available | Negative | 486853 - 487158 | 10942.8 |
| nucleoside-diphosphate-sugar epimerase | SAMN04244553_0667 | Not Available | Negative | 487734 - 488393 | 22264.5 |
| protein of unknown function | SAMN04244553_0668 | Not Available | Negative | 488423 - 488983 | 20115.5 |
| hypothetical protein | SAMN04244553_0670 | Not Available | Negative | 489352 - 489594 | 8965.57 |
| secretory lipase | SAMN04244553_0671 | Not Available | Positive | 489871 - 491085 | 42450.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

