Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04244553_5605 | Not Available | Negative | 6024509 - 6025432 | 32111.5 |
| predicted flavoprotein czco associated with the cation diffusion facilitator czcd | SAMN04244553_5606 | Not Available | Negative | 6025429 - 6026907 | 54990.4 |
| ferredoxin-nadp reductase | SAMN04244553_5607 | Not Available | Negative | 6026945 - 6028015 | 38821.7 |
| hypothetical protein | SAMN04244553_5608 | Not Available | Negative | 6028012 - 6028887 | 32701.4 |
| putative intracellular protease/amidase | SAMN04244553_5609 | Not Available | Positive | 6029043 - 6029738 | 24245.5 |
| tellurium resistance protein terz | SAMN04244553_5610 | Not Available | Positive | 6029965 - 6030546 | 20130.8 |
| transcriptional regulator, tetr family | SAMN04244553_5611 | Not Available | Negative | 6030575 - 6031171 | 21943.1 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04244553_5612 | Not Available | Positive | 6031350 - 6032102 | 25294.6 |
| hypothetical protein | SAMN04244553_5613 | Not Available | Positive | 6032160 - 6032345 | 6800.1 |
| mechanosensitive ion channel | SAMN04244553_5614 | Not Available | Positive | 6032463 - 6033566 | 40310.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

