Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytoene dehydrogenase-related protein | SAMN04244553_5595 | Not Available | Positive | 6014455 - 6015630 | 42240.2 |
| regulatory protein, luxr family | SAMN04244553_5596 | Not Available | Negative | 6015663 - 6018365 | 95757.8 |
| hypothetical protein | SAMN04244553_5597 | Not Available | Positive | 6018610 - 6019152 | 19192.7 |
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN04244553_5598 | Not Available | Negative | 6019205 - 6020143 | 33411.9 |
| hypothetical protein | SAMN04244553_5599 | Not Available | Positive | 6020332 - 6020757 | 15529.1 |
| putative holin-x, holin superfamily iii | SAMN04244553_5600 | Not Available | Positive | 6020881 - 6021318 | 14778.0 |
| protein of unknown function | SAMN04244553_5601 | Not Available | Positive | 6021315 - 6021755 | 16017.9 |
| protein of unknown function | SAMN04244553_5602 | Not Available | Positive | 6021752 - 6022012 | 9124.03 |
| transcriptional regulator, tetr family | SAMN04244553_5603 | Not Available | Negative | 6022037 - 6022654 | 21579.5 |
| alkyldihydroxyacetonephosphate synthase | SAMN04244553_5604 | Not Available | Negative | 6022651 - 6024270 | 58168.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

