Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | SAMN04244553_5585 | Not Available | Positive | 6004899 - 6006032 | 39493.7 |
| hypothetical protein | SAMN04244553_5586 | Not Available | Positive | 6006101 - 6006964 | 31343.3 |
| cell division protein ftsi/penicillin-binding protein 2 | SAMN04244553_5587 | Not Available | Positive | 6007034 - 6008809 | 61874.4 |
| protein of unknown function | SAMN04244553_5588 | Not Available | Negative | 6008847 - 6009344 | 18002.4 |
| predicted kinase | SAMN04244553_5589 | Not Available | Positive | 6009488 - 6010081 | 21498.7 |
| protein of unknown function | SAMN04244553_5590 | Not Available | Positive | 6010208 - 6010639 | 15751.8 |
| protein of unknown function | SAMN04244553_5591 | Not Available | Negative | 6010680 - 6011171 | 18041.5 |
| amino acid transporter | SAMN04244553_5592 | Not Available | Negative | 6011316 - 6012707 | 48836.4 |
| helix-turn-helix domain-containing protein | SAMN04244553_5593 | Not Available | Negative | 6012791 - 6013651 | 31961.4 |
| transcriptional regulator, tetr family | SAMN04244553_5594 | Not Available | Positive | 6013808 - 6014458 | 23596.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

