Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome recycling factor | SAMN04244553_5575 | Not Available | Positive | 5994932 - 5995489 | 20565.6 |
| phosphatidate cytidylyltransferase | SAMN04244553_5576 | Not Available | Positive | 5995535 - 5996530 | 34232.2 |
| uncharacterized integral membrane protein | SAMN04244553_5577 | Not Available | Positive | 5996699 - 5996956 | 9251.94 |
| 23s rrna m(2)a-2503 methyltransferase | SAMN04244553_5578 | Not Available | Positive | 5997109 - 5998218 | 39728.7 |
| serine/threonine protein kinase | SAMN04244553_5579 | Not Available | Positive | 5998235 - 5999857 | 58618.3 |
| hypothetical protein | SAMN04244553_5580 | Not Available | Negative | 6000036 - 6000452 | 15483.4 |
| dna-binding transcriptional regulator, lysr family | SAMN04244553_5581 | Not Available | Positive | 6000539 - 6001495 | 34774.7 |
| protein of unknown function | SAMN04244553_5582 | Not Available | Negative | 6001689 - 6001958 | 9891.05 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | SAMN04244553_5583 | Not Available | Positive | 6002102 - 6003241 | 39263.8 |
| rip metalloprotease rsep | SAMN04244553_5584 | Not Available | Positive | 6003380 - 6004576 | 42462.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

