Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l19p | SAMN04244553_5554 | Not Available | Positive | 5974482 - 5974823 | 12919.7 |
| signal peptidase i | SAMN04244553_5555 | Not Available | Positive | 5974934 - 5975677 | 27531.8 |
| rnase hii | SAMN04244553_5556 | Not Available | Positive | 5975705 - 5976490 | 27501.2 |
| protein of unknown function | SAMN04244553_5557 | Not Available | Positive | 5976614 - 5976919 | 12250.5 |
| putative endonuclease | SAMN04244553_5558 | Not Available | Positive | 5977234 - 5977590 | 13312.1 |
| magnesium chelatase family protein | SAMN04244553_5559 | Not Available | Positive | 5977590 - 5979098 | 52838.8 |
| dna processing protein | SAMN04244553_5560 | Not Available | Positive | 5979634 - 5980800 | 40917.1 |
| integrase/recombinase xerc | SAMN04244553_5561 | Not Available | Positive | 5981002 - 5981925 | 33648.2 |
| putative membrane protein | SAMN04244553_5562 | Not Available | Positive | 5982271 - 5982636 | 13023.2 |
| protein of unknown function | SAMN04244553_5563 | Not Available | Positive | 5982633 - 5982947 | 10804.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

