Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (guanine37-n(1)-) methyltransferase | SAMN04244553_5544 | Not Available | Positive | 5962015 - 5962698 | 25110.9 |
| hypothetical protein | SAMN04244553_5545 | Not Available | Negative | 5962708 - 5963100 | 14017.8 |
| gaf domain-containing protein | SAMN04244553_5546 | Not Available | Negative | 5963238 - 5964131 | 32412.1 |
| acetyl-coa synthetase | SAMN04244553_5547 | Not Available | Positive | 5964186 - 5965829 | 58368.2 |
| fatty-acyl-coa synthase | SAMN04244553_5548 | Not Available | Positive | 5965826 - 5967460 | 58791.7 |
| uncharacterized protein | SAMN04244553_5549 | Not Available | Positive | 5968046 - 5970466 | 86913.3 |
| hypothetical protein | SAMN04244553_5550 | Not Available | Positive | 5970500 - 5971372 | 32406.1 |
| rna polymerase, sigma subunit, ecf family | SAMN04244553_5551 | Not Available | Negative | 5971380 - 5972276 | 32312.0 |
| doxx-like family protein | SAMN04244553_5552 | Not Available | Positive | 5972468 - 5972956 | 17346.9 |
| fad/fmn-containing dehydrogenase | SAMN04244553_5553 | Not Available | Positive | 5972993 - 5974303 | 45423.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

