Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrogen regulatory protein p-ii family | SAMN04244553_5534 | Not Available | Positive | 5952820 - 5953158 | 12131.7 |
| utp--glnb (protein pii) uridylyltransferase, glnd | SAMN04244553_5535 | Not Available | Positive | 5953242 - 5955692 | 87074.2 |
| hypothetical protein | SAMN04244553_5536 | Not Available | Positive | 5955767 - 5956138 | 13513.0 |
| signal recognition particle subunit ffh/srp54 (srp54) | SAMN04244553_5537 | Not Available | Positive | 5956241 - 5957809 | 55248.6 |
| imidazolonepropionase | SAMN04244553_5538 | Not Available | Positive | 5958273 - 5959367 | 39287.5 |
| dihydrofolate reductase | SAMN04244553_5539 | Not Available | Positive | 5959606 - 5960160 | 20520.4 |
| hypothetical protein | SAMN04244553_5540 | Not Available | Negative | 5960213 - 5960386 | 6055.41 |
| ssu ribosomal protein s16p | SAMN04244553_5541 | Not Available | Positive | 5960672 - 5961103 | 15746.9 |
| hypothetical protein | SAMN04244553_5542 | Not Available | Positive | 5961186 - 5961428 | 8447.21 |
| 16s rrna processing protein rimm | SAMN04244553_5543 | Not Available | Positive | 5961429 - 5961953 | 18654.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

