Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pucr c-terminal helix-turn-helix domain-containing protein | SAMN04244553_0651 | Not Available | Negative | 471029 - 472288 | 44962.9 |
| hypothetical protein | SAMN04244553_0652 | Not Available | Negative | 472717 - 472893 | 6359.45 |
| ferredoxin | SAMN04244553_0653 | Not Available | Positive | 473407 - 473634 | 7992.43 |
| hypothetical protein | SAMN04244553_0654 | Not Available | Positive | 473634 - 474185 | 20953.4 |
| hypothetical protein | SAMN04244553_0655 | Not Available | Positive | 474191 - 475441 | 45045.5 |
| cholest-4-en-3-one 26-monooxygenase | SAMN04244553_0656 | Not Available | Positive | 475510 - 476736 | 45322.4 |
| sterol 14-demethylase | SAMN04244553_0657 | Not Available | Negative | 476822 - 478186 | 51067.9 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | SAMN04244553_0658 | Not Available | Positive | 478320 - 479549 | 43575.8 |
| nad-binding domain and a fe-s cluster-containing protein | SAMN04244553_0659 | Not Available | Negative | 479556 - 481340 | 64264.6 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN04244553_0660 | Not Available | Negative | 481333 - 482712 | 48800.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

