Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN04244553_5504 | Not Available | Negative | 5914782 - 5915969 | 42768.5 |
| winged helix dna-binding domain-containing protein | SAMN04244553_5505 | Not Available | Negative | 5916259 - 5917347 | 40866.9 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN04244553_5506 | Not Available | Negative | 5917407 - 5917847 | 16528.9 |
| hypothetical protein | SAMN04244553_5507 | Not Available | Positive | 5918013 - 5918561 | 19471.1 |
| k+-transporting atpase atpase c chain | SAMN04244553_5508 | Not Available | Negative | 5918659 - 5919543 | 30849.4 |
| k+-transporting atpase atpase b chain | SAMN04244553_5509 | Not Available | Negative | 5919545 - 5921698 | 75469.9 |
| k+-transporting atpase atpase a chain | SAMN04244553_5510 | Not Available | Negative | 5921700 - 5923370 | 58669.7 |
| k+-transporting atpase, kdpf subunit | SAMN04244553_5511 | Not Available | Negative | 5923371 - 5923568 | 6961.41 |
| hypothetical protein | SAMN04244553_5512 | Not Available | Positive | 5923926 - 5924084 | 5627.04 |
| two-component system, ompr family, sensor histidine kinase kdpd | SAMN04244553_5513 | Not Available | Positive | 5924126 - 5927134 | 105035.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

