Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division septum initiation diviva, interacts with ftsz, mind | SAMN04244553_5494 | Not Available | Positive | 5905612 - 5906364 | 27427.7 |
| uncharacterized protein | SAMN04244553_5495 | Not Available | Positive | 5906516 - 5907142 | 22394.2 |
| large subunit ribosomal protein l32 | SAMN04244553_5496 | Not Available | Positive | 5907197 - 5907379 | 6603.08 |
| rnase iii | SAMN04244553_5497 | Not Available | Positive | 5907402 - 5908124 | 25416.2 |
| dna-(apurinic or apyrimidinic site) lyase | SAMN04244553_5498 | Not Available | Positive | 5908126 - 5908986 | 31382.6 |
| dihydrofolate reductase | SAMN04244553_5499 | Not Available | Positive | 5909053 - 5909634 | 21315.6 |
| putative hydrolase | SAMN04244553_5500 | Not Available | Positive | 5909639 - 5910697 | 38061.0 |
| abc-type phosphate transport system, substrate-binding protein | SAMN04244553_5501 | Not Available | Positive | 5910798 - 5912360 | 55795.8 |
| hypothetical protein | SAMN04244553_5502 | Not Available | Negative | 5912391 - 5912576 | 6874.9 |
| glycogen debranching enzyme (alpha-1,6-glucosidase) | SAMN04244553_5503 | Not Available | Negative | 5912650 - 5914785 | 77097.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

