Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04244553_5483 | Not Available | Positive | 5890335 - 5891249 | 33691.5 |
| hypothetical protein | SAMN04244553_5484 | Not Available | Negative | 5891253 - 5892674 | 52407.9 |
| methylisocitrate lyase | SAMN04244553_5486 | Not Available | Positive | 5894201 - 5895124 | 32894.4 |
| citrate synthase | SAMN04244553_5487 | Not Available | Positive | 5895121 - 5896263 | 41771.3 |
| limonene-1,2-epoxide hydrolase | SAMN04244553_5488 | Not Available | Positive | 5896531 - 5896908 | 14028.5 |
| methionine synthase (b12-independent) | SAMN04244553_5489 | Not Available | Negative | 5897394 - 5899661 | 81469.1 |
| pyruvate carboxylase | SAMN04244553_5490 | Not Available | Positive | 5900267 - 5903671 | 121560.0 |
| 16s rrna (guanine966-n2)-methyltransferase | SAMN04244553_5491 | Not Available | Positive | 5903668 - 5904225 | 19342.1 |
| phosphopantetheine adenylyltransferase | SAMN04244553_5492 | Not Available | Positive | 5904246 - 5904731 | 17685.4 |
| gtra-like protein | SAMN04244553_5493 | Not Available | Negative | 5904801 - 5905313 | 17766.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

