Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04244553_5472 | Not Available | Negative | 5878477 - 5879445 | 33695.8 |
| thiamine-monophosphate kinase | SAMN04244553_5473 | Not Available | Positive | 5879545 - 5880603 | 36218.4 |
| uracil-dna glycosylase | SAMN04244553_5474 | Not Available | Positive | 5880615 - 5881298 | 24722.6 |
| hypothetical protein | SAMN04244553_5475 | Not Available | Positive | 5881375 - 5881629 | 8416.97 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04244553_5476 | Not Available | Positive | 5881688 - 5882569 | 31408.2 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase | SAMN04244553_5477 | Not Available | Negative | 5882571 - 5883359 | 26904.8 |
| lsu ribosomal protein l28p | SAMN04244553_5479 | Not Available | Negative | 5884031 - 5884222 | 6809.28 |
| hypothetical protein | SAMN04244553_5480 | Not Available | Positive | 5884500 - 5886347 | 63448.6 |
| atp-dependent dna helicase recg | SAMN04244553_5481 | Not Available | Positive | 5886358 - 5888634 | 81976.6 |
| drug resistance transporter, emrb/qaca subfamily | SAMN04244553_5482 | Not Available | Negative | 5888681 - 5890150 | 49816.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

