Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ppox class probable f420-dependent enzyme | SAMN04244553_5462 | Not Available | Negative | 5867791 - 5868291 | 18640.5 |
| transcriptional regulator, iclr family | SAMN04244553_5463 | Not Available | Negative | 5868325 - 5869026 | 24339.4 |
| 3-isopropylmalate dehydratase, large subunit | SAMN04244553_5464 | Not Available | Positive | 5869215 - 5870639 | 50481.2 |
| 3-isopropylmalate dehydratase, small subunit | SAMN04244553_5465 | Not Available | Positive | 5870677 - 5871285 | 22502.9 |
| dna-binding protein hu-beta | SAMN04244553_5466 | Not Available | Positive | 5871444 - 5872091 | 22072.2 |
| 8-oxo-dgtp diphosphatase | SAMN04244553_5467 | Not Available | Negative | 5872210 - 5873154 | 34678.4 |
| polyphosphate kinase | SAMN04244553_5468 | Not Available | Negative | 5873175 - 5875349 | 81028.7 |
| 2-phospho-l-lactate guanylyltransferase | SAMN04244553_5469 | Not Available | Negative | 5875421 - 5876104 | 23756.6 |
| glycerol 3-phosphate dehydrogenase (nad(p)+) | SAMN04244553_5470 | Not Available | Positive | 5876136 - 5877146 | 34488.3 |
| d-alanine-d-alanine ligase | SAMN04244553_5471 | Not Available | Positive | 5877234 - 5878325 | 38587.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

