Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_5451 | Not Available | Positive | 5857652 - 5857771 | 3957.81 |
| d-3-phosphoglycerate dehydrogenase | SAMN04244553_5452 | Not Available | Positive | 5858123 - 5859721 | 55554.7 |
| 3-isopropylmalate dehydrogenase | SAMN04244553_5453 | Not Available | Positive | 5859986 - 5860993 | 35133.8 |
| putative restriction endonuclease | SAMN04244553_5454 | Not Available | Positive | 5861090 - 5861689 | 21942.3 |
| major facilitator superfamily protein | SAMN04244553_5455 | Not Available | Negative | 5862023 - 5863204 | 40074.5 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN04244553_5456 | Not Available | Positive | 5863501 - 5864274 | 27346.7 |
| glutamyl-trna synthetase | SAMN04244553_5457 | Not Available | Positive | 5864288 - 5865763 | 54209.1 |
| Trna-gln | Not Available | Not Available | Positive | 5866016 - 5866087 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 5866236 - 5866308 | Not Available |
| hypothetical protein | SAMN04244553_5461 | Not Available | Negative | 5867081 - 5867263 | 6590.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

