Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| simple sugar transport system substrate-binding protein | SAMN04244553_5441 | Not Available | Positive | 5847774 - 5848772 | 33720.6 |
| simple sugar transport system permease protein | SAMN04244553_5442 | Not Available | Positive | 5848784 - 5849836 | 36869.5 |
| simple sugar transport system atp-binding protein | SAMN04244553_5443 | Not Available | Positive | 5849833 - 5850618 | 28143.3 |
| 5-dehydro-2-deoxygluconokinase | SAMN04244553_5444 | Not Available | Positive | 5850615 - 5851571 | 33068.8 |
| hypothetical protein | SAMN04244553_5445 | Not Available | Positive | 5851562 - 5852473 | 32060.6 |
| 5-deoxy-glucuronate isomerase | SAMN04244553_5446 | Not Available | Positive | 5852470 - 5853363 | 32233.9 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | SAMN04244553_5447 | Not Available | Positive | 5853354 - 5855198 | 64699.6 |
| cold shock protein, cspa family | SAMN04244553_5448 | Not Available | Positive | 5855330 - 5855626 | 10807.6 |
| cold-shock dna-binding protein family | SAMN04244553_5449 | Not Available | Positive | 5855782 - 5855988 | 7430.82 |
| hypothetical protein | SAMN04244553_5450 | Not Available | Negative | 5856027 - 5856836 | 30010.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

