Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase primary sigma factor | SAMN04244553_5431 | Not Available | Negative | 5831993 - 5835568 | 133029.0 |
| nuclease-related domain-containing protein | SAMN04244553_5432 | Not Available | Positive | 5835720 - 5837336 | 60261.5 |
| helicase conserved c-terminal domain-containing protein | SAMN04244553_5433 | Not Available | Positive | 5837333 - 5840497 | 117744.0 |
| hypothetical protein | SAMN04244553_5434 | Not Available | Positive | 5840494 - 5842386 | 69758.8 |
| hypothetical protein | SAMN04244553_5435 | Not Available | Positive | 5842383 - 5843483 | 41471.0 |
| hypothetical protein | SAMN04244553_5436 | Not Available | Positive | 5843558 - 5844079 | 19264.8 |
| hypothetical protein | SAMN04244553_5437 | Not Available | Negative | 5844086 - 5844376 | 10396.9 |
| myo-inositol 2-dehydrogenase / d-chiro-inositol 1-dehydrogenase | SAMN04244553_5438 | Not Available | Negative | 5844531 - 5845544 | 35688.2 |
| dna-binding transcriptional regulator, laci/purr family | SAMN04244553_5439 | Not Available | Negative | 5845586 - 5846587 | 35378.8 |
| inosose dehydratase | SAMN04244553_5440 | Not Available | Positive | 5846865 - 5847761 | 31813.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

