Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN04244553_0641 | Not Available | Positive | 460073 - 460699 | 22352.6 |
| polyketide cyclase / dehydrase and lipid transport | SAMN04244553_0642 | Not Available | Positive | 460705 - 461850 | 43850.4 |
| acyl-coa dehydrogenase | SAMN04244553_0643 | Not Available | Negative | 461921 - 463633 | 63304.0 |
| transcriptional regulator, tetr family | SAMN04244553_0644 | Not Available | Negative | 463777 - 464430 | 24037.4 |
| cysteine synthase | SAMN04244553_0645 | Not Available | Negative | 464438 - 465766 | 47638.6 |
| diaminopimelate decarboxylase | SAMN04244553_0646 | Not Available | Negative | 465766 - 467319 | 55537.4 |
| copper chaperone copz | SAMN04244553_0647 | Not Available | Negative | 467316 - 468602 | 47161.3 |
| cysteine desulfurase / selenocysteine lyase | SAMN04244553_0648 | Not Available | Negative | 468599 - 469930 | 47292.2 |
| pyridoxamine 5'-phosphate oxidase | SAMN04244553_0649 | Not Available | Positive | 470044 - 470475 | 16071.4 |
| cbs domain-containing protein | SAMN04244553_0650 | Not Available | Negative | 470485 - 470931 | 16421.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

