Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted n-acyltransferase, gnat family | SAMN04244553_5389 | Not Available | Positive | 5782070 - 5782576 | 18048.8 |
| hypothetical protein | SAMN04244553_5390 | Not Available | Negative | 5782676 - 5783326 | 22803.4 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit c | SAMN04244553_5391 | Not Available | Positive | 5783661 - 5783990 | 11516.5 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit a | SAMN04244553_5392 | Not Available | Positive | 5783987 - 5785459 | 51050.5 |
| lysophospholipase l1 | SAMN04244553_5393 | Not Available | Negative | 5785529 - 5786773 | 43218.9 |
| polyketide cyclase / dehydrase and lipid transport | SAMN04244553_5394 | Not Available | Negative | 5786865 - 5787311 | 16596.8 |
| uncharacterized membrane protein | SAMN04244553_5395 | Not Available | Negative | 5787473 - 5788897 | 50013.2 |
| hypothetical protein | SAMN04244553_5396 | Not Available | Negative | 5788894 - 5789757 | 29425.9 |
| signal transduction histidine kinase | SAMN04244553_5397 | Not Available | Positive | 5789927 - 5791123 | 42087.1 |
| two component transcriptional regulator, luxr family | SAMN04244553_5398 | Not Available | Positive | 5791176 - 5791841 | 23586.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

