Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleobase:cation symporter-1, ncs1 family | SAMN04244553_5369 | Not Available | Positive | 5760747 - 5762138 | 49272.8 |
| mfs transporter, putative metabolite transport protein | SAMN04244553_5370 | Not Available | Positive | 5762192 - 5763595 | 49677.1 |
| hypothetical protein | SAMN04244553_5371 | Not Available | Positive | 5763978 - 5764526 | 19988.8 |
| protein of unknown function | SAMN04244553_5372 | Not Available | Positive | 5764734 - 5765384 | 24232.7 |
| hypothetical protein | SAMN04244553_5373 | Not Available | Negative | 5766023 - 5766181 | 5745.86 |
| hypothetical protein | SAMN04244553_5374 | Not Available | Positive | 5766810 - 5767067 | 8980.91 |
| hypothetical protein | SAMN04244553_5375 | Not Available | Positive | 5767064 - 5767567 | 19004.5 |
| hypothetical protein | SAMN04244553_5376 | Not Available | Negative | 5767618 - 5768058 | 16060.8 |
| hypothetical protein | SAMN04244553_5377 | Not Available | Positive | 5768380 - 5768802 | 15055.9 |
| hypothetical protein | SAMN04244553_5378 | Not Available | Positive | 5768799 - 5769941 | 37957.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

