Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ethanolamine utilization protein eutq | SAMN04244553_5359 | Not Available | Positive | 5748004 - 5748381 | 13224.7 |
| s-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase | SAMN04244553_5360 | Not Available | Positive | 5748398 - 5749501 | 38238.9 |
| sarcosine oxidase subunit beta | SAMN04244553_5361 | Not Available | Positive | 5749567 - 5750730 | 41519.0 |
| aminobutyraldehyde dehydrogenase | SAMN04244553_5362 | Not Available | Positive | 5750740 - 5752227 | 51994.0 |
| crotonobetaine/carnitine-coa ligase | SAMN04244553_5363 | Not Available | Positive | 5752300 - 5753865 | 56539.1 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN04244553_5364 | Not Available | Positive | 5753887 - 5754642 | 25518.4 |
| 2,4-dienoyl-coa reductase | SAMN04244553_5365 | Not Available | Positive | 5754872 - 5756827 | 69950.6 |
| mspa protein | SAMN04244553_5366 | Not Available | Positive | 5757149 - 5757817 | 22006.8 |
| mspa protein | SAMN04244553_5367 | Not Available | Positive | 5757892 - 5758557 | 22319.9 |
| hypothetical protein | SAMN04244553_5368 | Not Available | Negative | 5759165 - 5760067 | 33173.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

