Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein, duf1697 family | SAMN04244553_5329 | Not Available | Negative | 5714930 - 5715469 | 20259.1 |
| acetyltransferase (isoleucine patch superfamily) | SAMN04244553_5330 | Not Available | Negative | 5715521 - 5716270 | 28229.3 |
| pqq-like domain-containing protein | SAMN04244553_5331 | Not Available | Positive | 5716497 - 5717828 | 45853.1 |
| (1->4)-alpha-d-glucan synthase (udp-glucose) | SAMN04244553_5332 | Not Available | Negative | 5717875 - 5719137 | 45344.0 |
| 1,4-alpha-glucan branching enzyme | SAMN04244553_5333 | Not Available | Negative | 5719134 - 5720720 | 57616.9 |
| methyltransferase domain-containing protein | SAMN04244553_5334 | Not Available | Negative | 5720717 - 5721526 | 29012.6 |
| electron transfer flavoprotein beta subunit | SAMN04244553_5335 | Not Available | Positive | 5721718 - 5722503 | 27482.8 |
| electron transfer flavoprotein alpha subunit apoprotein | SAMN04244553_5336 | Not Available | Positive | 5722542 - 5723498 | 31915.9 |
| protein of unknown function | SAMN04244553_5337 | Not Available | Positive | 5723638 - 5724207 | 20844.9 |
| hypothetical protein | SAMN04244553_5338 | Not Available | Positive | 5724204 - 5725358 | 42776.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

