Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prc-barrel domain-containing protein | SAMN04244553_0631 | Not Available | Positive | 451496 - 452194 | 25906.8 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN04244553_0632 | Not Available | Positive | 452281 - 452784 | 17820.9 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04244553_0633 | Not Available | Negative | 452792 - 453736 | 34534.3 |
| acyl-coa dehydrogenase | SAMN04244553_0634 | Not Available | Positive | 453958 - 455103 | 41433.9 |
| transcriptional regulator, tetr family | SAMN04244553_0635 | Not Available | Positive | 455087 - 455761 | 24681.5 |
| hypothetical protein | SAMN04244553_0636 | Not Available | Positive | 456123 - 456314 | 6114.58 |
| hypothetical protein | SAMN04244553_0637 | Not Available | Positive | 456561 - 457247 | 24000.3 |
| dna ligase d | SAMN04244553_0638 | Not Available | Negative | 457252 - 458253 | 37353.3 |
| atp-dependent dna ligase | SAMN04244553_0639 | Not Available | Negative | 458250 - 459332 | 40080.7 |
| cold shock protein, cspa family | SAMN04244553_0640 | Not Available | Negative | 459552 - 459941 | 13902.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

