Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SAMN04244553_3614 | Not Available | Negative | 3719545 - 3719778 | 8774.18 |
| Hth dna binding domain protein | SAMN04244553_3615 | Not Available | Negative | 3719781 - 3720833 | 38636.7 |
| hypothetical protein | SAMN04244553_3616 | Not Available | Negative | 3720830 - 3721117 | 10667.3 |
| hypothetical protein | SAMN04244553_3617 | Not Available | Negative | 3721237 - 3721575 | 11971.1 |
| Hypothetical protein | SAMN04244553_3618 | Not Available | Negative | 3721717 - 3721968 | 9511.41 |
| hypothetical protein | SAMN04244553_3619 | Not Available | Positive | 3722201 - 3722413 | 8036.63 |
| Attr | Not Available | Not Available | Positive | 3722473 - 3722484 | Not Available |
| Integrase | SAMN04244553_3620 | Not Available | Negative | 3722748 - 3723950 | 45031.5 |
| Immunity repressor | SAMN04244553_4533 | Not Available | Negative | 4753781 - 4754044 | 9729.74 |
| Cro protein | SAMN04244553_4534 | Not Available | Positive | 4754165 - 4754398 | 8508.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

