Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator receiver domain-containing protein | SAMN04244553_5309 | Not Available | Negative | 5693228 - 5694001 | 27164.2 |
| hypothetical protein | SAMN04244553_5310 | Not Available | Positive | 5694173 - 5694385 | 7811.36 |
| hypothetical protein | SAMN04244553_5311 | Not Available | Positive | 5694462 - 5694986 | 19459.2 |
| magnesium transporter | SAMN04244553_5312 | Not Available | Positive | 5695264 - 5696628 | 48562.4 |
| hypothetical protein | SAMN04244553_5313 | Not Available | Negative | 5696633 - 5697556 | 32594.6 |
| hypothetical protein | SAMN04244553_5314 | Not Available | Negative | 5697740 - 5698699 | 33882.0 |
| hypothetical protein | SAMN04244553_5315 | Not Available | Negative | 5698963 - 5699937 | 34793.3 |
| ribonucleoside-diphosphate reductase class ib beta subunit | SAMN04244553_5316 | Not Available | Positive | 5700392 - 5701354 | 36666.0 |
| protocatechuate 3,4-dioxygenase beta subunit | SAMN04244553_5317 | Not Available | Negative | 5701560 - 5702471 | 30459.3 |
| iron complex transport system substrate-binding protein | SAMN04244553_5318 | Not Available | Negative | 5702673 - 5703761 | 36981.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

