Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramoyl-l-alanine amidase | SAMN04244553_5289 | Not Available | Positive | 5674908 - 5676302 | 46851.7 |
| gtpase, g3e family | SAMN04244553_5290 | Not Available | Positive | 5676407 - 5677423 | 37542.9 |
| hypothetical protein | SAMN04244553_5291 | Not Available | Positive | 5677607 - 5677798 | 6924.02 |
| arac-type dna-binding protein | SAMN04244553_5292 | Not Available | Negative | 5677803 - 5678807 | 36667.7 |
| molybdopterin synthase catalytic subunit | SAMN04244553_5293 | Not Available | Negative | 5678903 - 5679337 | 15207.1 |
| cyclic pyranopterin phosphate synthase | SAMN04244553_5294 | Not Available | Negative | 5679324 - 5680334 | 34179.7 |
| molybdopterin molybdotransferase | SAMN04244553_5295 | Not Available | Negative | 5680378 - 5681598 | 41288.8 |
| cyclic pyranopterin phosphate synthase | SAMN04244553_5296 | Not Available | Positive | 5681716 - 5682759 | 37823.6 |
| molybdopterin converting factor, small subunit | SAMN04244553_5297 | Not Available | Positive | 5682752 - 5682994 | 8326.94 |
| uncharacterized conserved protein ydhg, yjbr/cyay-like superfamily, duf1801 family | SAMN04244553_5298 | Not Available | Positive | 5683219 - 5683584 | 13625.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

