Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter, mhs family, proline/betaine transporter | SAMN04244553_5279 | Not Available | Positive | 5666969 - 5668297 | 46923.6 |
| hypothetical protein | SAMN04244553_5280 | Not Available | Negative | 5668307 - 5668672 | 13054.2 |
| transcriptional regulator, tetr family | SAMN04244553_5281 | Not Available | Negative | 5668765 - 5669334 | 20197.7 |
| uncharacterized membrane protein | SAMN04244553_5282 | Not Available | Positive | 5669437 - 5669874 | 14910.9 |
| hypothetical protein | SAMN04244553_5283 | Not Available | Positive | 5669983 - 5670309 | 11656.0 |
| transcription termination factor rho | SAMN04244553_5284 | Not Available | Negative | 5670357 - 5671568 | 43491.6 |
| uncharacterized domain 1-containing protein | SAMN04244553_5285 | Not Available | Negative | 5672466 - 5672876 | 14603.7 |
| hypothetical protein | SAMN04244553_5286 | Not Available | Negative | 5672986 - 5673351 | 12954.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04244553_5287 | Not Available | Positive | 5673573 - 5674130 | 20272.4 |
| rieske | SAMN04244553_5288 | Not Available | Positive | 5674212 - 5674619 | 13613.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

