Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome p450 | SAMN04244553_5249 | Not Available | Positive | 5637380 - 5638558 | 44130.1 |
| dna-binding transcriptional regulator, merr family | SAMN04244553_5250 | Not Available | Negative | 5638545 - 5638994 | 16105.3 |
| methyltransferase domain-containing protein | SAMN04244553_5251 | Not Available | Negative | 5639027 - 5639581 | 20044.0 |
| fmn-dependent dehydrogenase, includes l-lactate dehydrogenase and type ii isopentenyl diphosphate isomerase | SAMN04244553_5252 | Not Available | Negative | 5639643 - 5640806 | 41206.4 |
| dna-binding transcriptional regulator, lrp family | SAMN04244553_5253 | Not Available | Positive | 5640919 - 5641959 | 37564.3 |
| protease i | SAMN04244553_5254 | Not Available | Positive | 5642122 - 5642676 | 19660.0 |
| cytochrome p450 | SAMN04244553_5255 | Not Available | Positive | 5642780 - 5644132 | 49310.9 |
| hypothetical protein | SAMN04244553_5256 | Not Available | Negative | 5644261 - 5644797 | 19634.6 |
| putative abc transport system permease protein | SAMN04244553_5257 | Not Available | Positive | 5644977 - 5645753 | 25545.9 |
| polyhydroxyalkanoate synthase | SAMN04244553_5258 | Not Available | Positive | 5645859 - 5646911 | 37681.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

