Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_5239 | Not Available | Positive | 5628348 - 5628521 | 6672.98 |
| alkaline phosphatase d | SAMN04244553_5240 | Not Available | Negative | 5628525 - 5630174 | 60404.7 |
| hypothetical protein | SAMN04244553_5241 | Not Available | Negative | 5630249 - 5630545 | 10199.0 |
| pas fold-containing protein | SAMN04244553_5242 | Not Available | Positive | 5630605 - 5631282 | 25207.0 |
| starvation-inducible dna-binding protein | SAMN04244553_5243 | Not Available | Positive | 5631362 - 5631841 | 17270.4 |
| hypothetical protein | SAMN04244553_5244 | Not Available | Positive | 5631898 - 5632656 | 27349.0 |
| uncharacterized conserved protein, aim24 family | SAMN04244553_5245 | Not Available | Negative | 5632734 - 5634461 | 57543.7 |
| hypothetical protein | SAMN04244553_5246 | Not Available | Positive | 5634890 - 5635186 | 9092.4 |
| dna ligase d, polymerase domain-containing protein | SAMN04244553_5247 | Not Available | Positive | 5635489 - 5636442 | 34502.0 |
| s-adenosyl methyltransferase | SAMN04244553_5248 | Not Available | Negative | 5636470 - 5637282 | 29713.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

