Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl transferase domain-containing protein | SAMN04244553_5226 | Not Available | Positive | 5604377 - 5620612 | 565516.0 |
| surfactin synthase thioesterase subunit | SAMN04244553_5230 | Not Available | Negative | 5620659 - 5621417 | 27060.0 |
| methyltransferase, tigr00027 family | SAMN04244553_5231 | Not Available | Negative | 5621410 - 5622267 | 31874.2 |
| hypothetical protein | SAMN04244553_5232 | Not Available | Positive | 5622764 - 5623546 | 25519.6 |
| protein of unknown function | SAMN04244553_5233 | Not Available | Positive | 5623575 - 5623742 | 5365.54 |
| protein of unknown function | SAMN04244553_5234 | Not Available | Positive | 5623739 - 5624770 | 36986.3 |
| drug/metabolite transporter, dme family | SAMN04244553_5235 | Not Available | Negative | 5625053 - 5626171 | 37339.6 |
| transcriptional regulator, tetr family | SAMN04244553_5236 | Not Available | Negative | 5626168 - 5626755 | 21031.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04244553_5237 | Not Available | Positive | 5626872 - 5627534 | 24498.7 |
| anti-sigma-k factor rska | SAMN04244553_5238 | Not Available | Positive | 5627531 - 5628250 | 24315.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

