Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna helicase/exodeoxyribonuclease v, alpha subunit | SAMN04244553_0621 | Not Available | Positive | 437847 - 439745 | 67638.1 |
| hypothetical protein | SAMN04244553_0622 | Not Available | Negative | 439775 - 440656 | 33010.1 |
| purine nucleosidase | SAMN04244553_0623 | Not Available | Negative | 440653 - 441693 | 37550.6 |
| transcriptional regulator, tetr family | SAMN04244553_0624 | Not Available | Positive | 441850 - 442434 | 20277.2 |
| mfs transporter, dha2 family, multidrug resistance protein | SAMN04244553_0625 | Not Available | Negative | 442748 - 444346 | 54665.0 |
| ss-a/ro ribonucleoprotein | SAMN04244553_0626 | Not Available | Positive | 444860 - 446458 | 57723.8 |
| coa-transferase family iii | SAMN04244553_0627 | Not Available | Negative | 446726 - 448072 | 46991.6 |
| surfactin synthase thioesterase subunit | SAMN04244553_0628 | Not Available | Positive | 448113 - 448877 | 27337.2 |
| catechol o-methyltransferase | SAMN04244553_0629 | Not Available | Negative | 448955 - 449749 | 28506.3 |
| short chain dehydrogenase | SAMN04244553_0630 | Not Available | Negative | 449820 - 451250 | 51301.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

