Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase f0 subcomplex b subunit | SAMN04244553_5213 | Not Available | Positive | 5586550 - 5587110 | 20432.1 |
| f-type h+-transporting atpase subunit delta | SAMN04244553_5214 | Not Available | Positive | 5587130 - 5587939 | 28473.8 |
| atp synthase f1 subcomplex alpha subunit | SAMN04244553_5215 | Not Available | Positive | 5588012 - 5589649 | 58720.6 |
| atp synthase f1 subcomplex gamma subunit | SAMN04244553_5216 | Not Available | Positive | 5589704 - 5590675 | 34982.4 |
| atp synthase f1 subcomplex beta subunit | SAMN04244553_5217 | Not Available | Positive | 5590701 - 5592149 | 52123.4 |
| f-type h+-transporting atpase subunit epsilon | SAMN04244553_5218 | Not Available | Positive | 5592156 - 5592533 | 13053.4 |
| protein of unknown function | SAMN04244553_5219 | Not Available | Positive | 5592720 - 5593142 | 15719.4 |
| cob(i)alamin adenosyltransferase | SAMN04244553_5220 | Not Available | Positive | 5593161 - 5593742 | 21000.8 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | SAMN04244553_5221 | Not Available | Positive | 5593809 - 5595107 | 45655.4 |
| acyl transferase domain-containing protein | SAMN04244553_5224 | Not Available | Positive | 5595745 - 5604365 | 299528.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

