Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homoserine kinase | SAMN04244553_5203 | Not Available | Positive | 5576395 - 5577351 | 32643.9 |
| transcription termination factor rho | SAMN04244553_5204 | Not Available | Positive | 5577660 - 5579708 | 73143.9 |
| lsu ribosomal protein l31p | SAMN04244553_5205 | Not Available | Positive | 5580381 - 5580617 | 8481.09 |
| bacterial peptide chain release factor 1 (brf-1) | SAMN04244553_5206 | Not Available | Positive | 5580756 - 5581826 | 38968.4 |
| release factor glutamine methyltransferase | SAMN04244553_5207 | Not Available | Positive | 5581879 - 5582784 | 32030.3 |
| translation factor sua5 | SAMN04244553_5208 | Not Available | Positive | 5582819 - 5583484 | 23056.8 |
| udp-glcnac:undecaprenyl-phosphate glcnac-1-phosphate transferase | SAMN04244553_5209 | Not Available | Positive | 5583501 - 5584658 | 40225.4 |
| hypothetical protein | SAMN04244553_5210 | Not Available | Positive | 5584669 - 5585127 | 15428.3 |
| atp synthase f0 subcomplex a subunit | SAMN04244553_5211 | Not Available | Positive | 5585393 - 5586223 | 30605.5 |
| atp synthase f0 subcomplex c subunit | SAMN04244553_5212 | Not Available | Positive | 5586299 - 5586544 | 8180.16 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

