Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted membrane protein | SAMN04244553_5183 | Not Available | Positive | 5551288 - 5552244 | 31548.9 |
| methylmalonate-semialdehyde dehydrogenase | SAMN04244553_5184 | Not Available | Positive | 5552465 - 5553964 | 53422.6 |
| hypothetical protein | SAMN04244553_5185 | Not Available | Positive | 5553970 - 5555109 | 40740.7 |
| enoyl-coa hydratase | SAMN04244553_5186 | Not Available | Positive | 5555183 - 5556244 | 37330.2 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN04244553_5187 | Not Available | Positive | 5556241 - 5557188 | 31913.0 |
| short chain enoyl-coa hydratase | SAMN04244553_5188 | Not Available | Positive | 5557185 - 5557961 | 28142.2 |
| hypothetical protein | SAMN04244553_5189 | Not Available | Negative | 5558019 - 5558867 | 29392.9 |
| molecular chaperone hsca | SAMN04244553_5190 | Not Available | Negative | 5558917 - 5559975 | 37080.6 |
| dna-binding transcriptional regulator, marr family | SAMN04244553_5191 | Not Available | Negative | 5560105 - 5560653 | 20100.2 |
| Trna-cys | Not Available | Not Available | Positive | 5560799 - 5560873 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

