Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN04244553_5163 | Not Available | Negative | 5527115 - 5527972 | 30073.2 |
| arac-type dna-binding protein | SAMN04244553_5164 | Not Available | Positive | 5528054 - 5529046 | 35323.2 |
| acyl-coa thioester hydrolase | SAMN04244553_5165 | Not Available | Positive | 5529043 - 5529465 | 15640.4 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN04244553_5166 | Not Available | Negative | 5529482 - 5530285 | 27533.9 |
| dna-binding transcriptional regulator, lrp family | SAMN04244553_5167 | Not Available | Negative | 5530312 - 5530806 | 17675.3 |
| pyruvate dehydrogenase e1 component alpha subunit | SAMN04244553_5168 | Not Available | Positive | 5530952 - 5532064 | 40440.4 |
| pyruvate dehydrogenase e1 component beta subunit | SAMN04244553_5169 | Not Available | Positive | 5532061 - 5533035 | 35133.1 |
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | SAMN04244553_5170 | Not Available | Positive | 5533063 - 5534394 | 46465.5 |
| benzoate membrane transport protein | SAMN04244553_5171 | Not Available | Negative | 5534381 - 5535604 | 40924.8 |
| thiosulfate/3-mercaptopyruvate sulfurtransferase | SAMN04244553_5172 | Not Available | Positive | 5535780 - 5536598 | 28464.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

