Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiosulfate/3-mercaptopyruvate sulfurtransferase | SAMN04244553_5132 | Not Available | Negative | 5487262 - 5488176 | 33702.2 |
| predicted transcriptional regulator, arsr family | SAMN04244553_5133 | Not Available | Positive | 5488343 - 5489134 | 28772.3 |
| septum formation protein | SAMN04244553_5134 | Not Available | Negative | 5489060 - 5489698 | 22214.6 |
| acyl-coa carboxylase epsilon subunit | SAMN04244553_5135 | Not Available | Negative | 5489695 - 5490024 | 11190.1 |
| propionyl-coa carboxylase beta chain | SAMN04244553_5136 | Not Available | Negative | 5490156 - 5491796 | 58603.9 |
| hypothetical protein | SAMN04244553_5137 | Not Available | Positive | 5492022 - 5492204 | 6724.54 |
| bira family transcriptional regulator, biotin operon repressor / biotin-[acetyl-coa-carboxylase] ligase | SAMN04244553_5138 | Not Available | Positive | 5492257 - 5493072 | 28442.9 |
| acyl-[acyl-carrier-protein] desaturase | SAMN04244553_5139 | Not Available | Negative | 5493131 - 5494084 | 36255.3 |
| ph domain-containing protein | SAMN04244553_5141 | Not Available | Positive | 5494284 - 5494823 | 20059.3 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04244553_5142 | Not Available | Positive | 5494861 - 5495538 | 24599.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

