Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 5475123 - 5475199 | Not Available |
| aldehyde dehydrogenase (nad+) | SAMN04244553_5123 | Not Available | Negative | 5475263 - 5476792 | 53525.0 |
| transcriptional regulator, asnc family | SAMN04244553_5124 | Not Available | Positive | 5476914 - 5477366 | 16402.7 |
| l-lysine 6-transaminase | SAMN04244553_5125 | Not Available | Positive | 5477431 - 5478780 | 49371.9 |
| 40-residue yvtn family beta-propeller repeat-containing protein | SAMN04244553_5126 | Not Available | Positive | 5479061 - 5480089 | 37387.3 |
| hypothetical protein | SAMN04244553_5127 | Not Available | Negative | 5480212 - 5480559 | 12406.4 |
| protein of unknown function | SAMN04244553_5128 | Not Available | Negative | 5480559 - 5480927 | 13335.1 |
| serine/threonine protein kinase | SAMN04244553_5129 | Not Available | Positive | 5481145 - 5483352 | 75277.6 |
| predicted phospholipase, patatin/cpla2 family | SAMN04244553_5130 | Not Available | Negative | 5484080 - 5485003 | 32940.6 |
| biotin carboxyl carrier protein /biotin carboxylase | SAMN04244553_5131 | Not Available | Negative | 5485164 - 5486969 | 63487.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

