Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_5102 | Not Available | Positive | 5450082 - 5450324 | 8860.7 |
| dna repair photolyase | SAMN04244553_5103 | Not Available | Positive | 5450324 - 5451490 | 44637.6 |
| exodeoxyribonuclease x | SAMN04244553_5104 | Not Available | Positive | 5451487 - 5452107 | 22136.7 |
| signal recognition particle subunit ffh/srp54 (srp54) | SAMN04244553_5105 | Not Available | Positive | 5452104 - 5452724 | 22985.2 |
| hypothetical protein | SAMN04244553_5106 | Not Available | Positive | 5452744 - 5453094 | 12347.7 |
| hypothetical protein | SAMN04244553_5107 | Not Available | Negative | 5453230 - 5453727 | 18277.1 |
| dna-binding transcriptional regulator, merr family | SAMN04244553_5108 | Not Available | Positive | 5453770 - 5454483 | 25359.4 |
| hypothetical protein | SAMN04244553_5109 | Not Available | Negative | 5454523 - 5455362 | 29277.5 |
| nte family protein | SAMN04244553_5110 | Not Available | Negative | 5455359 - 5456306 | 32855.6 |
| transcriptional regulator, tetr family | SAMN04244553_5111 | Not Available | Positive | 5456375 - 5456992 | 22209.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

