Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| drug resistance transporter, emrb/qaca subfamily | SAMN04244553_5052 | Not Available | Positive | 5402911 - 5404440 | 53038.8 |
| transcriptional regulator, tetr family | SAMN04244553_5053 | Not Available | Positive | 5404463 - 5405041 | 21429.7 |
| phenylalanine-4-hydroxylase | SAMN04244553_5054 | Not Available | Negative | 5405047 - 5405958 | 33518.4 |
| protein of unknown function | SAMN04244553_5055 | Not Available | Negative | 5406086 - 5406751 | 22618.9 |
| antitoxin of type ii ta system, vapb | SAMN04244553_5056 | Not Available | Positive | 5406872 - 5407075 | 7152.72 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04244553_5057 | Not Available | Negative | 5407130 - 5408626 | 53161.4 |
| alpha/beta hydrolase fold | SAMN04244553_5058 | Not Available | Negative | 5408730 - 5410274 | 54030.9 |
| dna repair protein radc | SAMN04244553_5059 | Not Available | Positive | 5410387 - 5411070 | 24457.7 |
| transcriptional regulator, tetr family | SAMN04244553_5060 | Not Available | Negative | 5411077 - 5411694 | 22236.5 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN04244553_5061 | Not Available | Positive | 5411756 - 5413000 | 45746.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

