Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_5042 | Not Available | Positive | 5394482 - 5394841 | 12559.8 |
| hypothetical protein | SAMN04244553_5043 | Not Available | Positive | 5394792 - 5395313 | 20003.3 |
| helix-turn-helix domain-containing protein | SAMN04244553_5044 | Not Available | Positive | 5395310 - 5396158 | 31797.1 |
| d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6) | SAMN04244553_5045 | Not Available | Positive | 5396300 - 5397637 | 46671.0 |
| membrane protein | SAMN04244553_5046 | Not Available | Negative | 5397656 - 5398678 | 36396.6 |
| tryptophanyl-trna synthetase | SAMN04244553_5047 | Not Available | Negative | 5398782 - 5399813 | 37691.0 |
| uncharacterized conserved protein, duf2236 family | SAMN04244553_5048 | Not Available | Negative | 5399776 - 5400780 | 37051.4 |
| transcriptional regulator, tetr family | SAMN04244553_5049 | Not Available | Positive | 5400904 - 5401539 | 22987.6 |
| barstar (barnase inhibitor) | SAMN04244553_5050 | Not Available | Negative | 5401683 - 5402174 | 17799.0 |
| guanyl-specific ribonuclease sa | SAMN04244553_5051 | Not Available | Negative | 5402174 - 5402734 | 19775.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

