Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04244553_5020 | Not Available | Positive | 5371947 - 5372192 | 8383.69 |
| nitroreductase | SAMN04244553_5021 | Not Available | Negative | 5372249 - 5372890 | 23013.4 |
| transcriptional regulator, hxlr family | SAMN04244553_5022 | Not Available | Positive | 5372960 - 5373337 | 14075.0 |
| homoserine o-acetyltransferase | SAMN04244553_5023 | Not Available | Negative | 5373415 - 5374560 | 40541.0 |
| o-acetylhomoserine (thiol)-lyase | SAMN04244553_5024 | Not Available | Negative | 5374557 - 5375885 | 46673.2 |
| transcriptional regulator, tetr family | SAMN04244553_5025 | Not Available | Negative | 5376135 - 5376986 | 30564.9 |
| drug resistance transporter, emrb/qaca subfamily | SAMN04244553_5026 | Not Available | Positive | 5377082 - 5378575 | 50861.7 |
| isocitrate dehydrogenase (nadp) | SAMN04244553_5027 | Not Available | Positive | 5378927 - 5380144 | 45158.8 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN04244553_5028 | Not Available | Negative | 5380309 - 5381196 | 30811.6 |
| transcriptional regulator, arac family with amidase-like domain | SAMN04244553_5029 | Not Available | Positive | 5381318 - 5382316 | 36117.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

